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R/S configuration: the CIP priority rules

How to assign R or S to a stereocenter using the Cahn–Ingold–Prelog priority rules, with the tricks for tied priorities.

Quick answer Rank the four groups at the stereocenter 1 (highest) to 4 (lowest) by atomic number, breaking ties at the next bond out. Orient the molecule so group 4 points away from you. If 1 → 2 → 3 goes clockwise, it's R; counter-clockwise, it's S.

Step 1: rank by atomic number

At the stereocenter, look at the atom directly bonded. Higher atomic number = higher priority. Br > Cl > F > O > N > C > H. For carbon-rich groups that tie at the first atom, go to the second atom outward.

Step 2: break ties at the next atom

If both first atoms are C, look at the atoms those carbons are bonded to. A carbon bonded to (O, O, H) beats a carbon bonded to (C, C, H). A double bond counts as two bonds to that atom — a C=O is treated as a C bonded to two O's. Go further out atom by atom until you find a difference.

Step 3: orient with #4 in back

Rotate the molecule (mentally, or on paper) so the lowest-priority group points away from you. If the lowest-priority group is already on a dash (going into the page), you can just read the rotation directly off the page. If it's on a wedge (coming out of the page), determine the rotation as drawn and then flip it.

Common worked examples

(R)-2-bromobutane: priorities Br > CH₂CH₃ > CH₃ > H. (S)-glyceraldehyde: priorities OH > CHO > CH₂OH > H. For amino acids, the L-form is (S) for everything except cysteine — where the sulfur in CH₂SH outranks the carboxyl, making L-cysteine (R).

Draw this on the whiteboard

Open the OChem Board whiteboard — benzene rings, wedge/dash bonds, and a clickable periodic table built in. No account needed.

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